MetaGeneMark

Wenhan Zhu, Alex Lomsadze and Mark Borodovsky Ab initio gene identification in metagenomic sequences Nucleic Acids Research (2010) 38, e132

John Besemer and Mark Borodovsky Heuristic approach to deriving models for gene finding Nucleic Acids Research (1999) 27, pp 3911-3920

This webpage provides accesses to gene prediction in metagenomes, utilizing metagenome parameters and gene prediction program GeneMark.hmm prokaryotic (version 3.25).

Browse MetaGeneMark manual

Input sequence

Enter sequence (FASTA or multi FASTA format) or, upload file:

Action

Options

Output format for gene prediction Output options Optional: results by E-mail LST GFF Protein sequence Gene nucleotide sequence E-mail Subject Compress files

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